Projects
Quantum Open Source Developer Survey
Description: A Web report on the 2023 Survey about Quantum Open Source Developers, by Unitary Fund.
The Tragedy of Visas
Year: 2023
Place: Milan, London
Stack: Quarto, R, Observable, D3.
Project URL: LSE Firoz Lalji Institute for Africa
Source Code: Github - Visa
Place: Milan, London
Stack: Quarto, R, Observable, D3.
Project URL: LSE Firoz Lalji Institute for Africa
Source Code: Github - Visa
Description: A collaboration with the LAGO Collective and Marta Foresti. “In a desperate attempt to keep people away, Europe is making it so much harder for people to visit for work or leisure, at the cost of collective opportunities. Shooting itself in the foot. Literally.”
Milan Air Quality V2
Year: 2023
Place: Milan
Stack: Quarto, R, Observable, D3.
Project URL: Visit the Dashboard
Source Code: Github - Milano Air Quality V2
Place: Milan
Stack: Quarto, R, Observable, D3.
Project URL: Visit the Dashboard
Source Code: Github - Milano Air Quality V2
Description: An upgrade to the same dashboard published previously, pushing the limits of Quarto and integrating it with web-based visualization developed in d3. This dashboard daily fetches the Air quality Open Data provided by the Municipality of Milan, and represent them graphically.
Milan Air Quality Dashboard
Year: 2022
Place: Milan
Stack: Quarto, GGplot2, GGiraph, Github Actions.
Project URL: Visit the Dashboard
Source Code: Github - Milano Air Quality
Place: Milan
Stack: Quarto, GGplot2, GGiraph, Github Actions.
Project URL: Visit the Dashboard
Source Code: Github - Milano Air Quality
Description: A proof-of-concept dashboard made with Quarto, GGiraph and deployed through Github Actions. Milan is one of the cities with the worst air quality in Europe. This dashboard daily fetches the Air quality Open Data provided by the Municipality of Milan, and represent them graphically.
Fluidigr
Year: 2018
Place: Montpellier, IRD
Stack: R package, qPCR.
Project URL: Package Manual
Source Code: Github - Fluidigr
Place: Montpellier, IRD
Stack: R package, qPCR.
Project URL: Package Manual
Source Code: Github - Fluidigr
Description: An R package to parse, normalize and visualize gene expression data from high throughput real-time qPCR data.
Ptrapr
Year: 2019
Place: Montpellier, IRD
Stack: R package, igraph phenotyping.
Project URL: Package Manual
Source Code: Github - Fluidigr
Place: Montpellier, IRD
Stack: R package, igraph phenotyping.
Project URL: Package Manual
Source Code: Github - Fluidigr
Description: An R package to analize the topology of rice panicles. The topology of African and Asian rice panicles changed when they were domesticated, adapting to farmer’s needs. Panicle topology can be detected and measured with a software from IRD, named P-trap, the R package ptrapr, parses and analyzes the output of P-trap.
Sunday Blues Blog
Description: A tiny blog that explored how scientific innovation was implemented, and what has been its impact on society.
Photosynthesis Booklet
Year: 2018
Place: Düsseldorf, CEPLAS
Stack: Bookdown
Project URL: Read the Booklet
Source Code: Github - ps-booklet
Place: Düsseldorf, CEPLAS
Stack: Bookdown
Project URL: Read the Booklet
Source Code: Github - ps-booklet
Description: An online booklet that explains why we do research on photosynthesis. What is photosynthesis? How do plants adapt to different levels of light? Why and how do we investigate it with transcriptomics?
Crossr
Year: 2017
Place: Düsseldorf - CEPLAS
Stack: R package, orthofinder, Salmon
Project URL: –
Source Code: Github - crossr
Place: Düsseldorf - CEPLAS
Stack: R package, orthofinder, Salmon
Project URL: –
Source Code: Github - crossr
Description: An R packages to compare expression of orthologues across closely related species. Closely related species can reveal how convergent traits, such as C4 photosynthesis, are evolved. This R packages allows to inspect the expression of orthology groups between two species, and to identify the groups that are expressed in different patterns.